Exploring urinary biomarkers for the diagnosis of diabetic and hypertensive chronic kidney disease: A promising pilot study

Urinary biomarkers for chronic kidney disease diagnosis

Authors

  • Sumana Saseevan National Institute of Fundamental Studies, Kandy, Sri Lanka https://orcid.org/0009-0000-9364-4785
  • Nadeesha Nishanthi Distric General Hospital Vavuniya, Sri Lanka
  • Sanath Rajapakse Department of Molecular Biology and Biotechnology, Faculty of Science, University of Peradeniya, Peradeniya, Sri Lanka. https://orcid.org/0000-0002-0014-5811
  • Dhammika Magana-Arachchi National Institute of Fundamental Studies, Kandy

DOI:

https://doi.org/10.56042/ijeb.v62i11.5858

Keywords:

Gene expression analysis, Non-invasive diagnosis, RT-qPCR (Reverse transcription quantitative polymerase chain reaction), Serum biomarker

Abstract

In the current clinical setting, conventional serum biomarkers such as serum creatinine (Scr) and estimated glomerular filtration rate (eGFR) have several lapses in chronic kidney disease (CKD) diagnosis. Diagnosing CKD using non-invasive methods is crucial for implementing prompt therapeutic interventions and preventing disease progression. This study aims to identify the potential diagnostic urinary biomarkers and their correlation with existing renal markers, Scr, eGFR, and proteinuria in diabetic and hypertensive CKD. RNA was extracted from eighty-two urine samples of CKD patients and healthy controls (HC) and reverse transcribed for gene expression analysis using quantitative polymerase chain reactions. The expression of NGAL, MMP9, ANXA3, OLFM4, PI3, and PRMT3 genes was analyzed relative to the reference gene, B2M. Fold changes (FC) in gene expression in diabetic nephropathy (DN), and hypertensive nephropathy (HT) were calculated against HC. Log2 normalized FC was used to determine significance levels and correlation with existing serum markers. NGAL, ANXA3, and OLFM4 exhibited the highest upregulations in DN with mean Log2FC 1.42, 2.66, and 5.87, respectively. A two-fold increase in NGAL FC was observed in early DN than in late DN, suggesting its potential as an early urinary biomarker for DN. PI3 and MMP9 were upregulated in HT patients with higher FC values. PRMT3 showed a significant negative correlation (P<0.05) in HT patients with Scr (r=−0.738) and proteinuria (r=−0.906). The gene panels including ANXA3, OLFM4, and NGAL, and PI3, PRMT3, and MMP9, could have potential diagnostic value in DN and HT, respectively.

Author Biographies

  • Sumana Saseevan, National Institute of Fundamental Studies, Kandy, Sri Lanka

    Working as lecturer in Medical Labortary Sciences, Faculty of Allied Health Sciences, University of Jaffna since 2017 and also currently reading Ph.D. at National Institute of Fundamental Studies, Kandy Sri Lanka since 2020.

  • Nadeesha Nishanthi, Distric General Hospital Vavuniya, Sri Lanka

    She is a Consultat Nephrologist, currently working at Teaching hospital, Anuradhapura, Sri Lanka.

  • Sanath Rajapakse, Department of Molecular Biology and Biotechnology, Faculty of Science, University of Peradeniya, Peradeniya, Sri Lanka.

    He is the Professor at the Deptartment of Molecular Biology and Biotechnology and the Dean of the faculty of Sciences, University of Peradeniya, Sri Lanka.

  • Dhammika Magana-Arachchi, National Institute of Fundamental Studies, Kandy

    I am the corresponding Author of this manuscript. I am the Associate Research Professor at Molecular Microbiology and Human Diseases Research programme in the National Institute of Fundametal Studies, Kandy, Sri Lanka.

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Published

06-12-2024

How to Cite

Exploring urinary biomarkers for the diagnosis of diabetic and hypertensive chronic kidney disease: A promising pilot study: Urinary biomarkers for chronic kidney disease diagnosis. (2024). Indian Journal of Experimental Biology (IJEB), 62(11), 884-894. https://doi.org/10.56042/ijeb.v62i11.5858

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